Raja Mazumder
Orcid: 0000-0001-8823-9945
According to our database1,
Raja Mazumder
authored at least 37 papers
between 2001 and 2021.
Collaborative distances:
Collaborative distances:
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Bibliography
2021
Database J. Biol. Databases Curation, 2021
Scanning window analysis of non-coding regions within normal-tumor whole-genome sequence samples.
Briefings Bioinform., 2021
COVID-19 biomarkers and their overlap with comorbidities in a disease biomarker data model.
Briefings Bioinform., 2021
Proceedings of the International Conference on Biomedical Ontologies 2021 co-located with the Workshop on Ontologies for the Behavioural and Social Sciences (OntoBess 2021) as part of the Bolzano Summer of Knowledge (BOSK 2021), 2021
2020
2019
<i>miCloud: </i> A Plug-n-Play, Extensible, On-Premises Bioinformatics Cloud for Seamless Execution of Complex Next-Generation Sequencing Data Analysis Pipelines.
J. Comput. Biol., 2019
OncoMX: an Integrated Cancer Mutation and Expression Knowledgebase for Biomarker Evaluation and Discovery.
Proceedings of the AMIA 2019, 2019
2018
BioMuta and BioXpress: mutation and expression knowledgebases for cancer biomarker discovery.
Nucleic Acids Res., 2018
Identification of key differentially expressed MicroRNAs in cancer patients through pan-cancer analysis.
Comput. Biol. Medicine, 2018
Database J. Biol. Databases Curation, 2018
2017
Pubcast and Genecast: Browsing and Exploring Publications and Associated Curated Content in Biology Through Mobile Devices.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017
2016
High-performance integrated virtual environment (HIVE): a robust infrastructure for next-generation sequence data analysis.
Database J. Biol. Databases Curation, 2016
2015
Advantages of distributed and parallel algorithms that leverage Cloud Computing platforms for large-scale genome assembly.
F1000Research, 2015
Generating a focused view of disease ontology cancer terms for pan-cancer data integration and analysis.
Database J. Biol. Databases Curation, 2015
BioXpress: an integrated RNA-seq-derived gene expression database for pan-cancer analysis.
Database J. Biol. Databases Curation, 2015
2014
Non-synonymous variations in cancer and their effects on the human proteome: workflow for NGS data biocuration and proteome-wide analysis of TCGA data.
BMC Bioinform., 2014
A framework for organizing cancer-related variations from existing databases, publications and NGS data using a High-performance Integrated Virtual Environment (HIVE).
Database J. Biol. Databases Curation, 2014
2013
Structure-based Comparative Analysis and Prediction of N-linked Glycosylation Sites in Evolutionarily Distant Eukaryotes.
Genom. Proteom. Bioinform., 2013
SNVDis: A Proteome-wide Analysis Service for Evaluating nsSNVs in Protein Functional Sites and Pathways.
Genom. Proteom. Bioinform., 2013
2012
Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference.
Database J. Biol. Databases Curation, 2012
2011
Bioinform., 2011
2008
Structure-Guided Comparative Analysis of Proteins: Principles, Tools, and Applications for Predicting Function.
PLoS Comput. Biol., 2008
Nucleic Acids Res., 2008
2007
2006
The Universal Protein Resource (UniProt): an expanding universe of protein information.
Nucleic Acids Res., 2006
2005
BMC Bioinform., 2005
2004
Nucleic Acids Res., 2004
GeneOrder3.0: Software for comparing the order of genes in pairs of small bacterial genomes.
BMC Bioinform., 2004
2003
Nucleic Acids Res., 2003
2002
Application of global computational tools GeneOrder and CoreGenes to the comparative analyses of chordopoxvirus genomes.
Inf. Sci., 2002
CoreGenes: A computational tool for identifying and cataloging "core" genes in a set of small genomes.
BMC Bioinform., 2002
Application of Global Computational Tools GeneOrder and OrthologLocator to the Comparative Analyses of Chordopoxvirus Genomes.
Proceedings of the 6th Joint Conference on Information Science, 2002
2001