Xiang Li

Orcid: 0000-0002-9851-6376

Affiliations:
  • Massachusetts General Hospital, Boston, MA, USA
  • University of Georgia, Department of Computer Science and Bioimaging Research Center, Athens, GA, USA (PhD 2016)


According to our database1, Xiang Li authored at least 227 papers between 2011 and 2025.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of two.

Timeline

Legend:

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Bibliography

2025
LLM-Guided Decoupled Probabilistic Prompt for Continual Learning in Medical Image Diagnosis.
IEEE Trans. Medical Imaging, August, 2025

Medical Reasoning in the Era of LLMs: A Systematic Review of Enhancement Techniques and Applications.
CoRR, August, 2025

iLearnRobot: An Interactive Learning-Based Multi-Modal Robot with Continuous Improvement.
CoRR, July, 2025

Bridging Brains and Machines: A Unified Frontier in Neuroscience, Artificial Intelligence, and Neuromorphic Systems.
CoRR, July, 2025

SPATIA: Multimodal Model for Prediction and Generation of Spatial Cell Phenotypes.
CoRR, July, 2025

SAMed-2: Selective Memory Enhanced Medical Segment Anything Model.
CoRR, July, 2025

Age Sensitive Hippocampal Functional Connectivity: New Insights from 3D CNNs and Saliency Mapping.
CoRR, July, 2025

Exploring the Trade-Offs: Unified Large Language Models vs Local Fine-Tuned Models for Highly-Specific Radiology NLI Task.
IEEE Trans. Big Data, June, 2025

AugGPT: Leveraging ChatGPT for Text Data Augmentation.
IEEE Trans. Big Data, June, 2025

DRARL: Disengagement-Reason-Augmented Reinforcement Learning for Efficient Improvement of Autonomous Driving Policy.
CoRR, June, 2025

RadFabric: Agentic AI System with Reasoning Capability for Radiology.
CoRR, June, 2025

Voxel-Level Brain States Prediction Using Swin Transformer.
CoRR, June, 2025

Towards a general-purpose foundation model for fMRI analysis.
CoRR, June, 2025

RoboEgo System Card: An Omnimodal Model with Native Full Duplexity.
CoRR, June, 2025

TumorGen: Boundary-Aware Tumor-Mask Synthesis with Rectified Flow Matching.
CoRR, May, 2025

Surf2CT: Cascaded 3D Flow Matching Models for Torso 3D CT Synthesis from Skin Surface.
CoRR, May, 2025

Cascaded 3D Diffusion Models for Whole-body 3D 18-F FDG PET/CT synthesis from Demographics.
CoRR, May, 2025

SLearnLLM: A Self-Learning Framework for Efficient Domain-Specific Adaptation of Large Language Models.
CoRR, May, 2025

REOBench: Benchmarking Robustness of Earth Observation Foundation Models.
CoRR, May, 2025

OWT: A Foundational Organ-Wise Tokenization Framework for Medical Imaging.
CoRR, May, 2025

MedReason: Eliciting Factual Medical Reasoning Steps in LLMs via Knowledge Graphs.
CoRR, April, 2025

Susceptibility of Large Language Models to User-Driven Factors in Medical Queries.
CoRR, March, 2025

MAST-Pro: Dynamic Mixture-of-Experts for Adaptive Segmentation of Pan-Tumors with Knowledge-Driven Prompts.
CoRR, March, 2025

Optimizing for the Shortest Path in Denoising Diffusion Model.
CoRR, March, 2025

Developing a PET/CT Foundation Model for Cross-Modal Anatomical and Functional Imaging.
CoRR, March, 2025

Shapley Value Estimation based on Differential Matrix.
Proc. ACM Manag. Data, February, 2025

Stable-SPAM: How to Train in 4-Bit More Stably than 16-Bit Adam.
CoRR, February, 2025

On the Trustworthiness of Generative Foundation Models: Guideline, Assessment, and Perspective.
CoRR, February, 2025

SearchRAG: Can Search Engines Be Helpful for LLM-based Medical Question Answering?
CoRR, February, 2025

A Survey of LLM-based Agents in Medicine: How far are we from Baymax?
CoRR, February, 2025

Masked Autoencoders Are Effective Tokenizers for Diffusion Models.
CoRR, February, 2025

Distribution-aware Fairness Learning in Medical Image Segmentation From A Control-Theoretic Perspective.
CoRR, February, 2025

Fine-Tuning Open-Source Large Language Models to Improve Their Performance on Radiation Oncology Tasks: A Feasibility Study to Investigate Their Potential Clinical Applications in Radiation Oncology.
CoRR, January, 2025

Large Language Models for Bioinformatics.
CoRR, January, 2025

EG-SpikeFormer: Eye-Gaze Guided Transformer on Spiking Neural Networks for Medical Image Analysis.
Proceedings of the 22nd IEEE International Symposium on Biomedical Imaging, 2025

Enhancing Cognition and Explainability of Multimodal Foundation Models with Self-Synthesized Data.
Proceedings of the Thirteenth International Conference on Learning Representations, 2025

ECHOPulse: ECG Controlled Echocardio-gram Video Generation.
Proceedings of the Thirteenth International Conference on Learning Representations, 2025

Impromptu Cybercrime Euphemism Detection.
Proceedings of the 31st International Conference on Computational Linguistics, 2025

A Survey of LLM-based Agents in Medicine: How far are we from Baymax?
Proceedings of the Findings of the Association for Computational Linguistics, 2025

2024
CE-GAN: Community Evolutionary Generative Adversarial Network for Alzheimer's Disease Risk Prediction.
IEEE Trans. Medical Imaging, November, 2024

An Iterative Optimizing Framework for Radiology Report Summarization With ChatGPT.
IEEE Trans. Artif. Intell., August, 2024

Structure Mapping Generative Adversarial Network for Multi-View Information Mapping Pattern Mining.
IEEE Trans. Pattern Anal. Mach. Intell., April, 2024

Instruction-ViT: Multi-modal prompts for instruction learning in vision transformer.
Inf. Fusion, April, 2024

P-Shapley: Shapley Values on Probabilistic Classifiers.
Proc. VLDB Endow., March, 2024

MA-SAM: Modality-agnostic SAM adaptation for 3D medical image segmentation.
Medical Image Anal., 2024

Zero-shot relation triplet extraction as Next-Sentence Prediction.
Knowl. Based Syst., 2024

Mask-guided BERT for few-shot text classification.
Neurocomputing, 2024

Enhancing LLMs for Impression Generation in Radiology Reports through a Multi-Agent System.
CoRR, 2024

Towards Next-Generation Medical Agent: How o1 is Reshaping Decision-Making in Medical Scenarios.
CoRR, 2024

HELENE: Hessian Layer-wise Clipping and Gradient Annealing for Accelerating Fine-tuning LLM with Zeroth-order Optimization.
CoRR, 2024

Hunyuan-Large: An Open-Source MoE Model with 52 Billion Activated Parameters by Tencent.
CoRR, 2024

EchoFM: Foundation Model for Generalizable Echocardiogram Analysis.
CoRR, 2024

High-Fidelity 3D Lung CT Synthesis in ARDS Swine Models Using Score-Based 3D Residual Diffusion Models.
CoRR, 2024

Retrieval Instead of Fine-tuning: A Retrieval-based Parameter Ensemble for Zero-shot Learning.
CoRR, 2024

ECHOPulse: ECG controlled echocardio-grams video generation.
CoRR, 2024

Mixture of Multicenter Experts in Multimodal Generative AI for Advanced Radiotherapy Target Delineation.
CoRR, 2024

Evaluation of OpenAI o1: Opportunities and Challenges of AGI.
CoRR, 2024

TTT-Unet: Enhancing U-Net with Test-Time Training Layers for Biomedical Image Segmentation.
CoRR, 2024

GP-GPT: Large Language Model for Gene-Phenotype Mapping.
CoRR, 2024

Sketch: A Toolkit for Streamlining LLM Operations.
CoRR, 2024

MGH Radiology Llama: A Llama 3 70B Model for Radiology.
CoRR, 2024

Open-domain Implicit Format Control for Large Language Model Generation.
CoRR, 2024

Biomedical SAM 2: Segment Anything in Biomedical Images and Videos.
CoRR, 2024

Can Large Language Models Automatically Jailbreak GPT-4V?
CoRR, 2024

Bora: Biomedical Generalist Video Generation Model.
CoRR, 2024

52B to 1T: Lessons Learned via Tele-FLM Series.
CoRR, 2024

Contrastive Learning Via Equivariant Representation.
CoRR, 2024

Tele-FLM Technical Report.
CoRR, 2024

Prompt-driven Universal Model for View-Agnostic Echocardiography Analysis.
CoRR, 2024

Eye-gaze Guided Multi-modal Alignment Framework for Radiology.
CoRR, 2024

Cardiac Magnetic Resonance 2D+T Short- and Long-axis Segmentation via Spatio-temporal SAM Adaptation.
CoRR, 2024

Not all Layers of LLMs are Necessary during Inference.
CoRR, 2024

Reasoning before Comparison: LLM-Enhanced Semantic Similarity Metrics for Domain Specialized Text Analysis.
CoRR, 2024

The Radiation Oncology NLP Database.
CoRR, 2024

TrustLLM: Trustworthiness in Large Language Models.
CoRR, 2024

Large Language Models for Robotics: Opportunities, Challenges, and Perspectives.
CoRR, 2024

Motion correction and super-resolution for multi-slice cardiac magnetic resonance imaging via an end-to-end deep learning approach.
Comput. Medical Imaging Graph., 2024

Retrieval-Augmented Code Generation for Universal Information Extraction.
Proceedings of the Natural Language Processing and Chinese Computing, 2024

Eye-gaze Guided Multi-modal Alignment for Medical Representation Learning.
Proceedings of the Advances in Neural Information Processing Systems 38: Annual Conference on Neural Information Processing Systems 2024, 2024

Biomedical Visual Instruction Tuning with Clinician Preference Alignment.
Proceedings of the Advances in Neural Information Processing Systems 38: Annual Conference on Neural Information Processing Systems 2024, 2024

Volumetric Conditional Score-Based Residual Diffusion Model for PET/MR Denoising.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

Conditional Score-Based Diffusion Model for Cortical Thickness Trajectory Prediction.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

Hallucination Index: An Image Quality Metric for Generative Reconstruction Models.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

F2TNet: FMRI to T1w MRI Knowledge Transfer Network for Brain Multi-phenotype Prediction.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

Medical Image Synthesis via Fine-Grained Image-Text Alignment and Anatomy-Pathology Prompting.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2024, 2024

Temporal-Spatial Adaptation of Promptable SAM Enhance Accuracy and Generalizability of Cine CMR Segmentation.
Proceedings of the Foundation Models for General Medical AI, 2024

High-Resolution 3d Ct Synthesis From Bidirectional X-Ray Images Using 3d Diffusion Model.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024

Zero-Shot Novel View Synthesis of Wrist X-Rays Using Latent Diffusion Model.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024

Learning Dynamic Brain Connectome with Graph Transformers for Psychiatric Diagnosis Classification.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024

Motion Correction and Super-Resolution for Multi-slice Cardiac Magnetic Resonance Imaging via a Multi-stage Deep Learning Approach.
Proceedings of the IEEE International Symposium on Biomedical Imaging, 2024


Visual In-Context Learning for Large Vision-Language Models.
Proceedings of the Findings of the Association for Computational Linguistics, 2024

KnowCoder: Coding Structured Knowledge into LLMs for Universal Information Extraction.
Proceedings of the 62nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 2024

Fine-Grained Image-Text Alignment in Medical Imaging Enables Explainable Cyclic Image-Report Generation.
Proceedings of the 62nd Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), 2024

DI-V2X: Learning Domain-Invariant Representation for Vehicle-Infrastructure Collaborative 3D Object Detection.
Proceedings of the Thirty-Eighth AAAI Conference on Artificial Intelligence, 2024

2023
Autonomous Driving Policy Continual Learning With One-Shot Disengagement Case.
IEEE Trans. Intell. Veh., February, 2023

Hummingbird: Dynamic Path Validation With Hidden Equal-Probability Sampling.
IEEE Trans. Inf. Forensics Secur., 2023

Large-scale Graph Representation Learning of Dynamic Brain Connectome with Transformers.
CoRR, 2023

Fine-Grained Image-Text Alignment in Medical Imaging Enables Cyclic Image-Report Generation.
CoRR, 2023

Holistic Evaluation of GPT-4V for Biomedical Imaging.
CoRR, 2023

Jailbreaking GPT-4V via Self-Adversarial Attacks with System Prompts.
CoRR, 2023

Multimodal ChatGPT for Medical Applications: an Experimental Study of GPT-4V.
CoRR, 2023

APP-RUSS: Automated Path Planning for Robotic Ultrasound System.
CoRR, 2023

ChatRadio-Valuer: A Chat Large Language Model for Generalizable Radiology Report Generation Based on Multi-institution and Multi-system Data.
CoRR, 2023

MedEdit: Model Editing for Medical Question Answering with External Knowledge Bases.
CoRR, 2023

PolicyGPT: Automated Analysis of Privacy Policies with Large Language Models.
CoRR, 2023

RadOnc-GPT: A Large Language Model for Radiation Oncology.
CoRR, 2023

Radiology-Llama2: Best-in-Class Large Language Model for Radiology.
CoRR, 2023

Quantifying and Attributing the Hallucination of Large Language Models via Association Analysis.
CoRR, 2023

FLM-101B: An Open LLM and How to Train It with $100K Budget.
CoRR, 2023

Evaluating Large Language Models for Radiology Natural Language Processing.
CoRR, 2023

CohortGPT: An Enhanced GPT for Participant Recruitment in Clinical Study.
CoRR, 2023

Exploring Multimodal Approaches for Alzheimer's Disease Detection Using Patient Speech Transcript and Audio Data.
CoRR, 2023

Identification of Causal Relationship between Amyloid-beta Accumulation and Alzheimer's Disease Progression via Counterfactual Inference.
CoRR, 2023

SAMAug: Point Prompt Augmentation for Segment Anything Model.
CoRR, 2023

Review of Large Vision Models and Visual Prompt Engineering.
CoRR, 2023

Segment Anything Model (SAM) for Radiation Oncology.
CoRR, 2023

AD-AutoGPT: An Autonomous GPT for Alzheimer's Disease Infodemiology.
CoRR, 2023

Radiology-GPT: A Large Language Model for Radiology.
CoRR, 2023

Shapley Value on Probabilistic Classifiers.
CoRR, 2023

Artificial General Intelligence for Medical Imaging.
CoRR, 2023

BiomedGPT: A Unified and Generalist Biomedical Generative Pre-trained Transformer for Vision, Language, and Multimodal Tasks.
CoRR, 2023

ChatGraph: Interpretable Text Classification by Converting ChatGPT Knowledge to Graphs.
CoRR, 2023

FreeLM: Fine-Tuning-Free Language Model.
CoRR, 2023

Instruction-ViT: Multi-Modal Prompts for Instruction Learning in ViT.
CoRR, 2023

Prompt Engineering for Healthcare: Methodologies and Applications.
CoRR, 2023

Differentiate ChatGPT-generated and Human-written Medical Texts.
CoRR, 2023

ChatABL: Abductive Learning via Natural Language Interaction with ChatGPT.
CoRR, 2023

Exploring the Trade-Offs: Unified Large Language Models vs Local Fine-Tuned Models for Highly-Specific Radiology NLI Task.
CoRR, 2023

ImpressionGPT: An Iterative Optimizing Framework for Radiology Report Summarization with ChatGPT.
CoRR, 2023

Evaluating Large Language Models on a Highly-specialized Topic, Radiation Oncology Physics.
CoRR, 2023

Summary of ChatGPT/GPT-4 Research and Perspective Towards the Future of Large Language Models.
CoRR, 2023

When Brain-inspired AI Meets AGI.
CoRR, 2023

DeID-GPT: Zero-shot Medical Text De-Identification by GPT-4.
CoRR, 2023

ChatAug: Leveraging ChatGPT for Text Data Augmentation.
CoRR, 2023

Mask-guided BERT for Few Shot Text Classification.
CoRR, 2023

Tailoring Large Language Models to Radiology: A Preliminary Approach to LLM Adaptation for a Highly Specialized Domain.
Proceedings of the Machine Learning in Medical Imaging - 14th International Workshop, 2023

Graph-Based Counterfactual Causal Inference Modeling for Neuroimaging Analysis.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023 Workshops, 2023

Multi-task Learning for Hierarchically-Structured Images: Study on Echocardiogram View Classification.
Proceedings of the Simplifying Medical Ultrasound - 4th International Workshop, 2023

ShapleyFL: Robust Federated Learning Based on Shapley Value.
Proceedings of the 29th ACM SIGKDD Conference on Knowledge Discovery and Data Mining, 2023

ChatGraph: Interpretable Text Classification by Converting ChatGPT Knowledge to Graphs.
Proceedings of the IEEE International Conference on Data Mining, 2023

Disentangled and Robust Representation Learning for Bragging Classification in Social Media.
Proceedings of the IEEE International Conference on Acoustics, 2023

Multimodal Approaches for Alzheimer's Detection Using Patients' Speech and Transcript.
Proceedings of the Brain Informatics - 16th International Conference, 2023

Coarse-to-fine Knowledge Graph Domain Adaptation based on Distantly-supervised Iterative Training.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

LWSIS: LiDAR-Guided Weakly Supervised Instance Segmentation for Autonomous Driving.
Proceedings of the Thirty-Seventh AAAI Conference on Artificial Intelligence, 2023

2022
Coarse-to-fine Knowledge Graph Domain Adaptation based on Distantly-supervised Iterative Training.
CoRR, 2022

ClinicalRadioBERT: Knowledge-Infused Few Shot Learning for Clinical Notes Named Entity Recognition.
Proceedings of the Machine Learning in Medical Imaging - 13th International Workshop, 2022

View Classification of Color Doppler Echocardiography via Automatic Alignment Between Doppler and B-Mode Imaging.
Proceedings of the Simplifying Medical Ultrasound - Third International Workshop, 2022

CofeNet: Context and Former-Label Enhanced Net for Complicated Quotation Extraction.
Proceedings of the 29th International Conference on Computational Linguistics, 2022

2021
Left Ventricle Quantification Challenge: A Comprehensive Comparison and Evaluation of Segmentation and Regression for Mid-Ventricular Short-Axis Cardiac MR Data.
IEEE J. Biomed. Health Informatics, 2021

Deep metric learning-based image retrieval system for chest radiograph and its clinical applications in COVID-19.
Medical Image Anal., 2021

Development and Validation of a Deep Learning Model for Prediction of Severe Outcomes in Suspected COVID-19 Infection.
CoRR, 2021

Using Keystroke Analytics to Understand Cognitive Processes during Writing.
Proceedings of the 14th International Conference on Educational Data Mining, 2021

2020
Automated Semantic Segmentation of Red Blood Cells for Sickle Cell Disease.
IEEE J. Biomed. Health Informatics, 2020

Four-Dimensional Modeling of fMRI Data via Spatio-Temporal Convolutional Neural Networks (ST-CNNs).
IEEE Trans. Cogn. Dev. Syst., 2020

Sparse Representation-Based Denoising for High-Resolution Brain Activation and Functional Connectivity Modeling: A Task fMRI Study.
IEEE Access, 2020

Spatiotemporal Attention Autoencoder (STAAE) for ADHD Classification.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

Discovering Functional Brain Networks with 3D Residual Autoencoder (ResAE).
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2020, 2020

A Novel fMRI Representation Learning Framework with GAN.
Proceedings of the Machine Learning in Medical Imaging - 11th International Workshop, 2020

ASCNET: Adaptive-Scale Convolutional Neural Networks for Multi-Scale Feature Learning.
Proceedings of the 17th IEEE International Symposium on Biomedical Imaging, 2020

Efficient Classification via Partial Co-Training for Virtual Metrology.
Proceedings of the 25th IEEE International Conference on Emerging Technologies and Factory Automation, 2020

Multi-label Detection and Classification of Red Blood Cells in Microscopic Images.
Proceedings of the 2020 IEEE International Conference on Big Data (IEEE BigData 2020), 2020

ConvLab-2: An Open-Source Toolkit for Building, Evaluating, and Diagnosing Dialogue Systems.
Proceedings of the 58th Annual Meeting of the Association for Computational Linguistics: System Demonstrations, 2020

2019
Experimental Comparisons of Sparse Dictionary Learning and Independent Component Analysis for Brain Network Inference From fMRI Data.
IEEE Trans. Biomed. Eng., 2019

A Distributed Computing Platform for fMRI Big Data Analytics.
IEEE Trans. Big Data, 2019

Functional Neuroimaging in the New Era of Big Data.
Genom. Proteom. Bioinform., 2019

Consensus Neural Network for Medical Imaging Denoising with Only Noisy Training Samples.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Novel Radiomic Features Based on Graph Theory for PET Image Analysis.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

Automated Segmentation Of Cervical Nuclei In Pap Smear Images Using Deformable Multi-Path Ensemble Model.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

Multi-Size Computer-Aided Diagnosis Of Positron Emission Tomography Images Using Graph Convolutional Networks.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

3D Regional Shape Analysis of Left Ventricle Using MR Images: Abnormal Myocadium Detection and Classification.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

Predicting Alzheimer's Disease by Hierarchical Graph Convolution from Positron Emission Tomography Imaging.
Proceedings of the 2019 IEEE International Conference on Big Data (IEEE BigData), 2019

ConvLab: Multi-Domain End-to-End Dialog System Platform.
Proceedings of the 57th Conference of the Association for Computational Linguistics, 2019

2018
Temporal Dynamics Assessment of Spatial Overlap Pattern of Functional Brain Networks Reveals Novel Functional Architecture of Cerebral Cortex.
IEEE Trans. Biomed. Eng., 2018

Spatio-temporal modeling of connectome-scale brain network interactions via time-evolving graphs.
NeuroImage, 2018

A Dictionary Learning Approach for Signal Sampling in Task-Based fMRI for Reduction of Big Data.
Frontiers Neuroinformatics, 2018

Network Modeling and Pathway Inference from Incomplete Data ("PathInf").
CoRR, 2018

Modeling 4D fMRI Data via Spatio-Temporal Convolutional Neural Networks (ST-CNN).
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

RBC Semantic Segmentation for Sickle Cell Disease Based on Deformable U-Net.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2018, 2018

Multi-estimator Full Left Ventricle Quantification Through Ensemble Learning.
Proceedings of the Statistical Atlases and Computational Models of the Heart. Atrial Segmentation and LV Quantification Challenges, 2018

Medical image segmentation based on multi-modal convolutional neural network: Study on image fusion schemes.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018

2017
Transcriptome Architecture of Adult Mouse Brain Revealed by Sparse Coding of Genome-Wide In Situ Hybridization Images.
Neuroinformatics, 2017

Medical Image Segmentation Based on Multi-Modal Convolutional Neural Network: Study on Image Fusion Schemes.
CoRR, 2017

Image Segmentation and Classification for Sickle Cell Disease using Deformable U-Net.
CoRR, 2017

Distributed rank-1 dictionary learning: Towards fast and scalable solutions for fMRI big data analytics.
CoRR, 2017

Self-paced Convolutional Neural Network for Computer Aided Detection in Medical Imaging Analysis.
Proceedings of the Machine Learning in Medical Imaging - 8th International Workshop, 2017

Dictionary Learning and Sparse Coding-Based Denoising for High-Resolution Task Functional Connectivity MRI Analysis.
Proceedings of the Machine Learning in Medical Imaging - 8th International Workshop, 2017

Template-guided Functional Network Identification via Supervised Dictionary Learning.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

Exploring human brain activation via nested sparse coding and functional operators.
Proceedings of the 14th IEEE International Symposium on Biomedical Imaging, 2017

2016
Machine learning approaches towards holistic brain functional space discovery from fMRI big data.
PhD thesis, 2016

Predicting Movie Trailer Viewer's "Like/Dislike" via Learned Shot Editing Patterns.
IEEE Trans. Affect. Comput., 2016

Discover Mouse Gene Coexpression Landscape Using Dictionary Learning and Sparse Coding.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Modeling Functional Dynamics of Cortical Gyri and Sulci.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016, 2016

Scalable Fast Rank-1 Dictionary Learning for fMRI Big Data Analysis.
Proceedings of the 22nd ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2016

Identifying group-wise consistent sub-networks via spatial sparse representation of natural stimulus FMRI data.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

Modeling functional network dynamics via multi-scale dictionary learning and network continuums.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

Multple-demand system identification and characterization via sparse representations of fMRI data.
Proceedings of the 13th IEEE International Symposium on Biomedical Imaging, 2016

Implementing dictionary learning in Apache Flink, Or: How I learned to relax and love iterations.
Proceedings of the 2016 IEEE International Conference on Big Data (IEEE BigData 2016), 2016

Distributed rank-1 dictionary learning: Towards fast and scalable solutions for fMRI big data analytics.
Proceedings of the 2016 IEEE International Conference on Big Data (IEEE BigData 2016), 2016

2015
Holistic Atlases of Functional Networks and Interactions Reveal Reciprocal Organizational Architecture of Cortical Function.
IEEE Trans. Biomed. Eng., 2015

Sparse representation of whole-brain fMRI signals for identification of functional networks.
Medical Image Anal., 2015

HAFNI-enabled largescale platform for neuroimaging informatics (HELPNI).
Brain Informatics, 2015

Characterizing and differentiating task-based and resting state FMRI signals via two-stage dictionary learning.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

Interactive exemplar-based segmentation toolkit for biomedical image analysis.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

Signal sampling for efficient sparse representation of resting state FMRI data.
Proceedings of the 12th IEEE International Symposium on Biomedical Imaging, 2015

Dynamic Bayesian brain network partition and connectivity change point detection.
Proceedings of the 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, 2015

2014
Sparse representation of working memory processes based on fMRI data.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Learning fMRI-guided predictor of video shot changes.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Exploring consistent functional brain networks during free viewing of videos via sparse representation.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Detecting cell assembly interaction patterns via Bayesian based change-point detection and graph inference model.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Dynamic network partition via Bayesian connectivity bi-partition change point model.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Exploring functional brain dynamics via a Bayesian connectivity change point model.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Generalized fMRI activation detection via Bayesian magnitude change point model.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

Discovering network-level functional interactions from working memory fMRI data.
Proceedings of the IEEE 11th International Symposium on Biomedical Imaging, 2014

2013
Detecting Brain State Changes via Fiber-Centered Functional Connectivity Analysis.
Neuroinformatics, 2013

Characterization of task-free and task-performance brain states via functional connectome patterns.
Medical Image Anal., 2013

Sparse Representation of Higher-Order Functional Interaction Patterns in Task-Based FMRI Data.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Sparse Representation of Group-Wise FMRI Signals.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Modeling Dynamic Functional Information Flows on Large-Scale Brain Networks.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2013, 2013

Activated cliques: Network-based activation detection in task-based FMRI.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Identifying functional connectomics abnormality in attention deficit hyperactivity disorder.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Discovering common functional connectomics signatures.
Proceedings of the 10th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2013

Exploring High-Order Functional Interactions via Structurally-Weighted LASSO Models.
Proceedings of the Information Processing in Medical Imaging, 2013

2012
Inferring consistent functional interaction patterns from natural stimulus FMRI data.
NeuroImage, 2012

Characterization of Task-Free/Task-Performance Brain States.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2012, 2012

2011
Fiber-Centered Granger Causality Analysis.
Proceedings of the Medical Image Computing and Computer-Assisted Intervention - MICCAI 2011, 2011

Brain state change detection via fiber-centered functional connectivity analysis.
Proceedings of the 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2011


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