Davide Gadioli

According to our database, Davide Gadioli authored at least 39 papers between 2014 and 2024.

Collaborative distances:

• Dijkstra number of four.
• Erdős number of three.

2024

GPU-optimized approaches to molecular docking-based virtual screening in drug discovery: A comparative analysis.

Emanuele Vitali, Federico Ficarelli, Mauro Bisson, Davide Gadioli, Gianmarco Accordi, Massimiliano Fatica, Andrea Rosario Beccari, Gianluca Palermo

J. Parallel Distributed Comput., April, 2024

Unlocking performance portability on LUMI-G supercomputer: A virtual screening case study.

Gianmarco Accordi, Davide Gadioli, Gianluca Palermo, Luigi Crisci, Lorenzo Carpentieri, Biagio Cosenza, Andrea Rosario Beccari

Proceedings of the 12th International Workshop on OpenCL and SYCL, 2024

2023

EXSCALATE: An Extreme-Scale Virtual Screening Platform for Drug Discovery Targeting Polypharmacology to Fight SARS-CoV-2.

Davide Gadioli, Emanuele Vitali, Federico Ficarelli, Chiara Latini, Candida Manelfi, Carmine Talarico, Cristina Silvano, Carlo Cavazzoni, Gianluca Palermo, Andrea Rosario Beccari

IEEE Trans. Emerg. Top. Comput., 2023

Improving computation efficiency using input and architecture features for a virtual screening application.

Gianmarco Accordi, Emanuele Vitali, Davide Gadioli, Luigi Crisci, Biagio Cosenza, Mauro Bisson, Massimiliano Fatica, Andrea Beccari, Gianluca Palermo

CoRR, 2023

Domain-Specific Energy Modeling for Drug Discovery and Magnetohydrodynamics Applications.

Lorenzo Carpentieri, Marco D'Antonio, Kaijie Fan, Luigi Crisci, Biagio Cosenza, Federico Ficarelli, Daniele Cesarini, Gianmarco Accordi, Davide Gadioli, Gianluca Palermo, Peter Thoman, Philip Salzmann, Philipp Gschwandtner, Markus Wippler, Filippo Marchetti, Daniele Gregori, Andrea Rosario Beccari

Proceedings of the SC '23 Workshops of The International Conference on High Performance Computing, 2023

Tunable and Portable Extreme-Scale Drug Discovery Platform at Exascale: the LIGATE Approach.

Gianluca Palermo, Gianmarco Accordi, Davide Gadioli, Emanuele Vitali, Cristina Silvano, Bruno Guindani, Danilo Ardagna, Andrea Rosario Beccari, Domenico Bonanni, Carmine Talarico, Filippo Lunghini, Jan Martinovic, Paulo Silva, Ada Bohm, Jakub Beránek, Jan Krenek, Branislav Jansik, Biagio Cosenza, Luigi Crisci, Peter Thoman, Philip Salzmann, Thomas Fahringer, Leila T. Alexander, Gerardo Tauriello, Torsten Schwede, Janani Durairaj, Andrew Emerson, Federico Ficarelli, Sebastian Wingbermühle, Eric Lindahl, Daniele Gregori, Emanuele Sana, Silvano Coletti, Philipp Gschwandtner

Proceedings of the 20th ACM International Conference on Computing Frontiers, 2023

2022

Pegasus: Performance Engineering for Software Applications Targeting HPC Systems.

Pedro Pinto, João Bispo, João M. P. Cardoso, Jorge G. Barbosa, Davide Gadioli, Gianluca Palermo, Jan Martinovic, Martin Golasowski, Katerina Slaninová, Radim Cmar, Cristina Silvano

IEEE Trans. Software Eng., 2022

Legio: fault resiliency for embarrassingly parallel MPI applications.

Roberto Rocco, Davide Gadioli, Gianluca Palermo

J. Supercomput., 2022

GPU-optimized Approaches to Molecular Docking-based Virtual Screening in Drug Discovery: A Comparative Analysis.

Emanuele Vitali, Federico Ficarelli, Mauro Bisson, Davide Gadioli, Massimiliano Fatica, Andrea Rosario Beccari, Gianluca Palermo

CoRR, 2022

Towards a Portable Drug Discovery Pipeline with SYCL 2020.

Luigi Crisci, Majid Salimi Beni, Biagio Cosenza, Nicolò Scipione, Davide Gadioli, Emanuele Vitali, Gianluca Palermo, Andrea Beccari

Proceedings of the IWOCL'22: International Workshop on OpenCL, Bristol, United Kingdom, May 10, 2022

An extreme-scale virtual screening platform for drug discovery.

Davide Gadioli, Emanuele Vitali, Federico Ficarelli, Chiara Latini, Candida Manelfi, Carmine Talarico, Cristina Silvano, Andrea Rosario Beccari, Gianluca Palermo

Proceedings of the CF '22: 19th ACM International Conference on Computing Frontiers, Turin, Italy, May 17, 2022

2021

Tunable approximations to control time-to-solution in an HPC molecular docking Mini-App.

Davide Gadioli, Gianluca Palermo, Stefano Cherubin, Emanuele Vitali, Giovanni Agosta, Candida Manelfi, Andrea Rosario Beccari, Carlo Cavazzoni, Nico Sanna, Cristina Silvano

J. Supercomput., 2021

An Efficient Monte Carlo-Based Probabilistic Time-Dependent Routing Calculation Targeting a Server-Side Car Navigation System.

Emanuele Vitali, Davide Gadioli, Gianluca Palermo, Martin Golasowski, João Bispo, Pedro Pinto, Jan Martinovic, Katerina Slaninová, João M. P. Cardoso, Cristina Silvano

IEEE Trans. Emerg. Top. Comput., 2021

A Review on Parallel Virtual Screening Softwares for High Performance Computers.

Natarajan Arul Murugan, Artur Podobas, Davide Gadioli, Emanuele Vitali, Gianluca Palermo, Stefano Markidis

CoRR, 2021

EXSCALATE: An extreme-scale in-silico virtual screening platform to evaluate 1 trillion compounds in 60 hours on 81 PFLOPS supercomputers.

Davide Gadioli, Emanuele Vitali, Federico Ficarelli, Chiara Latini, Candida Manelfi, Carmine Talarico, Cristina Silvano, Carlo Cavazzoni, Gianluca Palermo, Andrea Rosario Beccari

CoRR, 2021

Understanding the I/O Impact on the Performance of High-Throughput Molecular Docking.

Stefano Markidis, Davide Gadioli, Emanuele Vitali, Gianluca Palermo

Proceedings of the 6th IEEE/ACM International Parallel Data Systems Workshop, 2021

Parametric Throughput Oriented Large Integer Multipliers for High Level Synthesis.

Emanuele Vitali, Davide Gadioli, Fabrizio Ferrandi, Gianluca Palermo

Proceedings of the Design, Automation & Test in Europe Conference & Exhibition, 2021

2019

Dynamic application autotuning for self-aware approximate computing.

Davide Gadioli

PhD thesis, 2019

Exploiting OpenMP and OpenACC to accelerate a geometric approach to molecular docking in heterogeneous HPC nodes.

Emanuele Vitali, Davide Gadioli, Gianluca Palermo, Andrea Beccari, Carlo Cavazzoni, Cristina Silvano

J. Supercomput., 2019

mARGOt: A Dynamic Autotuning Framework for Self-Aware Approximate Computing.

Davide Gadioli, Emanuele Vitali, Gianluca Palermo, Cristina Silvano

IEEE Trans. Computers, 2019

The ANTAREX domain specific language for high performance computing.

Cristina Silvano, Giovanni Agosta, Andrea Bartolini, Andrea Rosario Beccari, Luca Benini, Loïc Besnard, João Bispo, Radim Cmar, João M. P. Cardoso, Carlo Cavazzoni, Daniele Cesarini, Stefano Cherubin, Federico Ficarelli, Davide Gadioli, Martin Golasowski, Antonio Libri, Jan Martinovic, Gianluca Palermo, Emanuele Vitali

Microprocess. Microsystems, 2019

Exploiting OpenMP & OpenACC to Accelerate a Molecular Docking Mini-App in Heterogeneous HPC Nodes.

Emanuele Vitali, Davide Gadioli, Gianluca Palermo, Andrea Beccari, Carlo Cavazzoni, Cristina Silvano

CoRR, 2019

On-line Application Autotuning Exploiting Ensemble Models.

Tomás Martinovic, Davide Gadioli, Gianluca Palermo, Cristina Silvano

CoRR, 2019

The ANTAREX Domain Specific Language for High Performance Computing.

Cristina Silvano, Giovanni Agosta, Andrea Bartolini, Andrea Rosario Beccari, Luca Benini, Loïc Besnard, João Bispo, Radim Cmar, João M. P. Cardoso, Carlo Cavazzoni, Daniele Cesarini, Stefano Cherubin, Federico Ficarelli, Davide Gadioli, Martin Golasowski, Antonio Libri, Jan Martinovic, Gianluca Palermo, Pedro Pinto, Erven Rohou, Katerina Slaninová, Emanuele Vitali

CoRR, 2019

Supporting the Scale-Up of High Performance Application to Pre-Exascale Systems: The ANTAREX Approach.

Cristina Silvano, Giovanni Agosta, Andrea Bartolini, Andrea Rosario Beccari, Luca Benini, Loïc Besnard, João Bispo, Radim Cmar, João M. P. Cardoso, Carlo Cavazzoni, Daniele Cesarini, Stefano Cherubin, Federico Ficarelli, Davide Gadioli, Martin Golasowski, Imane Lasri, Antonio Libri, Candida Manelfi, Jan Martinovic, Gianluca Palermo, Pedro Pinto, Erven Rohou, Nico Sanna, Katerina Slaninová, Emanuele Vitali

Proceedings of the 27th Euromicro International Conference on Parallel, 2019

An hybrid approach to accelerate a molecular docking application for virtual screening in heterogeneous nodes: POSTER.

Emanuele Vitali, Davide Gadioli, Andrea Beccari, Carlo Cavazzoni, Cristina Silvano, Gianluca Palermo

Proceedings of the 16th ACM International Conference on Computing Frontiers, 2019

2018

Design Space Pruning and Computational Workload Splitting for Autotuning OpenCL Applications.

Ahmet Erdem, Davide Gadioli, Gianluca Palermo, Cristina Silvano

Proceedings of the RAPIDO 2018 Workshop on Rapid Simulation and Performance Evaluation: Methods and Tools, 2018

Accelerating a Geometric Approach to Molecular Docking with OpenACC.

Emanuele Vitali, Davide Gadioli, Gianluca Palermo, Andrea Beccari, Cristina Silvano

Proceedings of the 6th International Workshop on Parallelism in Bioinformatics, 2018

ANTAREX: A DSL-Based Approach to Adaptively Optimizing and Enforcing Extra-Functional Properties in High Performance Computing.

Cristina Silvano, Giovanni Agosta, Andrea Bartolini, Andrea Rosario Beccari, Luca Benini, Loïc Besnard, João Bispo, Radim Cmar, João M. P. Cardoso, Carlo Cavazzoni, Stefano Cherubin, Davide Gadioli, Martin Golasowski, Imane Lasri, Jan Martinovic, Gianluca Palermo, Pedro Pinto, Erven Rohou, Nico Sanna, Katerina Slaninová, Emanuele Vitali

Proceedings of the 21st Euromicro Conference on Digital System Design, 2018

SOCRATES - A seamless online compiler and system runtime autotuning framework for energy-aware applications.

Davide Gadioli, Ricardo Nobre, Pedro Pinto, Emanuele Vitali, Amir H. Ashouri, Gianluca Palermo, João M. P. Cardoso, Cristina Silvano

Proceedings of the 2018 Design, Automation & Test in Europe Conference & Exhibition, 2018

Autotuning and adaptivity in energy efficient HPC systems: the ANTAREX toolbox.

Cristina Silvano, Gianluca Palermo, Giovanni Agosta, Amir H. Ashouri, Davide Gadioli, Stefano Cherubin, Emanuele Vitali, Luca Benini, Andrea Bartolini, Daniele Cesarini, João M. P. Cardoso, João Bispo, Pedro Pinto, Ricardo Nobre, Erven Rohou, Loïc Besnard, Imane Lasri, Nico Sanna, Carlo Cavazzoni, Radim Cmar, Jan Martinovic, Katerina Slaninová, Martin Golasowski, Andrea Rosario Beccari, Candida Manelfi

Proceedings of the 15th ACM International Conference on Computing Frontiers, 2018

2017

CONTREX: Design of embedded mixed-criticality CONTRol systems under consideration of EXtra-functional properties.

Kim Grüttner, Ralph Görgen, Sören Schreiner, Fernando Herrera, Pablo Peñil, Julio L. Medina, Eugenio Villar, Gianluca Palermo, William Fornaciari, Carlo Brandolese, Davide Gadioli, Emanuele Vitali, Davide Zoni, Sara Bocchio, Luca Ceva, Paolo Azzoni, Massimo Poncino, Sara Vinco, Enrico Macii, Salvatore Cusenza, John M. Favaro, Raúl Valencia, Ingo Sander, Kathrin Rosvall, Nima Khalilzad, Davide Quaglia

Microprocess. Microsystems, 2017

The ANTAREX tool flow for monitoring and autotuning energy efficient HPC systems.

Cristina Silvano, Giovanni Agosta, Jorge G. Barbosa, Andrea Bartolini, Andrea Rosario Beccari, Luca Benini, João Bispo, João M. P. Cardoso, Carlo Cavazzoni, Stefano Cherubin, Radim Cmar, Davide Gadioli, Candida Manelfi, Jan Martinovic, Ricardo Nobre, Gianluca Palermo, Martin Palkovic, Pedro Pinto, Erven Rohou, Nico Sanna, Katerina Slaninová

Proceedings of the 2017 International Conference on Embedded Computer Systems: Architectures, 2017

2016

CONTREX: Design of Embedded Mixed-Criticality CONTRol Systems under Consideration of EXtra-Functional Properties.

Ralph Görgen, Kim Grüttner, Fernando Herrera, Pablo Peñil, Julio L. Medina, Eugenio Villar, Gianluca Palermo, William Fornaciari, Carlo Brandolese, Davide Gadioli, Sara Bocchio, Luca Ceva, Paolo Azzoni, Massimo Poncino, Sara Vinco, Enrico Macii, Salvatore Cusenza, John M. Favaro, Raúl Valencia, Ingo Sander, Kathrin Rosvall, Davide Quaglia

Proceedings of the 2016 Euromicro Conference on Digital System Design, 2016

Application Adaptation at Runtime through Dynamic Knobs Autotuning.

Davide Gadioli, Gianluca Palermo, Cristina Silvano

Proceedings of the 1st International Workshop on RESource Awareness and Application Auto-tuning in Adaptive and heterogeNeous compuTing co-located with 19th International Conference on Design, 2016

The ANTAREX approach to autotuning and adaptivity for energy efficient HPC systems.

Cristina Silvano, Giovanni Agosta, Stefano Cherubin, Davide Gadioli, Gianluca Palermo, Andrea Bartolini, Luca Benini, Jan Martinovic, Martin Palkovic, Katerina Slaninová, João Bispo, João M. P. Cardoso, Rui Abreu, Pedro Pinto, Carlo Cavazzoni, Nico Sanna, Andrea Rosario Beccari, Radim Cmar, Erven Rohou

Proceedings of the ACM International Conference on Computing Frontiers, CF'16, 2016

2015

Application autotuning to support runtime adaptivity in multicore architectures.

Davide Gadioli, Gianluca Palermo, Cristina Silvano

Proceedings of the 2015 International Conference on Embedded Computer Systems: Architectures, 2015

2014

OpenCL Application Auto-tuning and Run-Time Resource Management for Multi-core Platforms.

Davide Gadioli, Simone Libutti, Giuseppe Massari, Edoardo Paone, Michele Scandale, Patrick Bellasi, Gianluca Palermo, Vittorio Zaccaria, Giovanni Agosta, William Fornaciari, Cristina Silvano

Proceedings of the IEEE International Symposium on Parallel and Distributed Processing with Applications, 2014

Evaluating orthogonality between application auto-tuning and run-time resource management for adaptive OpenCL applications.

Edoardo Paone, Davide Gadioli, Gianluca Palermo, Vittorio Zaccaria, Cristina Silvano

Proceedings of the IEEE 25th International Conference on Application-Specific Systems, 2014