Jonathan Timmis
Orcid: 0000-0003-1055-0471Affiliations:
- University of York, UK
According to our database1,
Jonathan Timmis
authored at least 227 papers
between 1998 and 2023.
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Bibliography
2023
Morpho Evolution With Learning Using a Controller Archive as an Inheritance Mechanism.
IEEE Trans. Cogn. Dev. Syst., 2023
Proceedings of the Applicable Formal Methods for Safe Industrial Products, 2023
2022
Assessing ranking and effectiveness of evolutionary algorithm hyperparameters using global sensitivity analysis methodologies.
Swarm Evol. Comput., 2022
A study of error diversity in robotic swarms for task partitioning in foraging tasks.
Frontiers Robotics AI, 2022
2021
Robotics, 2021
2020
IEEE ACM Trans. Comput. Biol. Bioinform., 2020
Robotics, 2020
Proceedings of the 2020 IEEE Symposium Series on Computational Intelligence, 2020
Proceedings of the 2020 IEEE Symposium Series on Computational Intelligence, 2020
Proceedings of the 2020 Conference on Artificial Life, 2020
2019
IEEE Trans. Robotics, 2019
IEEE Trans. Neural Networks Learn. Syst., 2019
RoboChart: modelling and verification of the functional behaviour of robotic applications.
Softw. Syst. Model., 2019
Proceedings of the Towards Autonomous Robotic Systems - 20th Annual Conference, 2019
Proceedings of the Analysis of Experimental Algorithms - Special Event, 2019
The ARE Robot Fabricator: How to (Re)produce Robots that Can Evolve in the Real World.
Proceedings of the 2019 Conference on Artificial Life, 2019
Proceedings of the Artificial Neural Networks and Machine Learning - ICANN 2019: Theoretical Neural Computation, 2019
Comparing The Performance of Explicit and Implicit Communication in Simple Object Manipulation Tasks.
Proceedings of the 15th IEEE International Conference on Automation Science and Engineering, 2019
2018
Homeostatic Fault Tolerance in Spiking Neural Networks: A Dynamic Hardware Perspective.
IEEE Trans. Circuits Syst. I Regul. Pap., 2018
Frontiers Robotics AI, 2018
The Need for Combining Implicit and Explicit Communication in Cooperative Robotic Systems.
Frontiers Robotics AI, 2018
Cognitively-inspired homeostatic architecture can balance conflicting needs in robots.
CoRR, 2018
Proceedings of the 31st International Conference on VLSI Design and 17th International Conference on Embedded Systems, 2018
Proceedings of the Towards Autonomous Robotic Systems - 19th Annual Conference, 2018
A Hormone-Inspired Arbitration System For Self Identifying Abilities Amongst A Heterogeneous Robot Swarm.
Proceedings of the IEEE Symposium Series on Computational Intelligence, 2018
Proceedings of the IEEE Symposium Series on Computational Intelligence, 2018
FPGA-based Fault-injection and Data Acquisition of Self-repairing Spiking Neural Network Hardware.
Proceedings of the IEEE International Symposium on Circuits and Systems, 2018
Proceedings of the Integrated Formal Methods - 14th International Conference, 2018
2017
Proceedings of the Encyclopedia of Machine Learning and Data Mining, 2017
Extending and Applying Spartan to Perform Temporal Sensitivity Analyses for Predicting Changes in Influential Biological Pathways in Computational Models.
IEEE ACM Trans. Comput. Biol. Bioinform., 2017
ASPASIA: A toolkit for evaluating the effects of biological interventions on SBML model behaviour.
PLoS Comput. Biol., 2017
Towards Fault Diagnosis in Robot Swarms: An Online Behaviour Characterisation Approach.
Proceedings of the Towards Autonomous Robotic Systems - 18th Annual Conference, 2017
Fault diagnosis in robot swarms: An adaptive online behaviour characterisation approach.
Proceedings of the 2017 IEEE Symposium Series on Computational Intelligence, 2017
Assessing Self-Repair on FPGAs with Biologically Realistic Astrocyte-Neuron Networks.
Proceedings of the 2017 IEEE Computer Society Annual Symposium on VLSI, 2017
Proceedings of the 2017 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2017
Proceedings of the 2017 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2017
Proceedings of the Integrated Formal Methods - 13th International Conference, 2017
Proceedings of the Neural Information Processing - 24th International Conference, 2017
Homeostatic fault tolerance in spiking neural networks utilizing dynamic partial reconfiguration of FPGAs.
Proceedings of the International Conference on Field Programmable Technology, 2017
Proceedings of the 2017 IEEE Congress on Evolutionary Computation, 2017
Proceedings of the 2017 IEEE Congress on Evolutionary Computation, 2017
2016
Leukocyte Motility Models Assessed through Simulation and Multi-objective Optimization-Based Model Selection.
PLoS Comput. Biol., 2016
Hybrid Societies: Challenges and Perspectives in the Design of Collective Behavior in Self-organizing Systems.
Frontiers Robotics AI, 2016
An immune-inspired swarm aggregation algorithm for self-healing swarm robotic systems.
Biosyst., 2016
Proceedings of the Towards Autonomous Robotic Systems - 17th Annual Conference, 2016
Proceedings of the Towards Autonomous Robotic Systems - 17th Annual Conference, 2016
Proceedings of the 2016 IEEE Symposium Series on Computational Intelligence, 2016
Proceedings of the 2016 International Joint Conference on Neural Networks, 2016
Proceedings of the International Conference on Embedded Wireless Systems and Networks, 2016
Proceedings of the Distributed Autonomous Robotic Systems, 2016
Proceedings of the Swarm Intelligence - 10th International Conference, 2016
2015
Proceedings of the Evolvable Hardware - From Practice to Application, 2015
Utilising a simulation platform to understand the effect of domain model assumptions.
Nat. Comput., 2015
An Adaptive Classification Framework for Unsupervised Model Updating in Nonstationary Environments.
Proceedings of the Machine Learning, Optimization, and Big Data, 2015
Proceedings of the Information Processing in Cells and Tissues, 2015
Using Multi-Objective Artificial Immune Systems to Find Core Collections Based on Molecular Markers.
Proceedings of the Genetic and Evolutionary Computation Conference, 2015
A Multi-objective Optimization Approach Associated to Climate Change Analysis to Improve Systematic Conservation Planning.
Proceedings of the Evolutionary Multi-Criterion Optimization, 2015
Proceedings of the Thirteenth European Conference Artificial Life, 2015
Proceedings of the Thirteenth European Conference Artificial Life, 2015
2014
Hardware architecture of the Protein Processing Associative Memory and the effects of dimensionality and quantisation on performance.
Genet. Program. Evolvable Mach., 2014
Des. Autom. Embed. Syst., 2014
Proceedings of the Advances in Autonomous Robotics Systems - 15th Annual Conference, 2014
Run-time detection of faults in autonomous mobile robots based on the comparison of simulated and real robot behaviour.
Proceedings of the 2014 IEEE/RSJ International Conference on Intelligent Robots and Systems, 2014
Multi-objective optimization applied to systematic conservation planning and spatial conservation priorities under climate change.
Proceedings of the Genetic and Evolutionary Computation Conference, 2014
Proceedings of the 2014 IEEE Symposium on Computational Intelligence in Dynamic and Uncertain Environments, 2014
Proceedings of the Fourteenth International Conference on the Simulation and Synthesis of Living Systems, 2014
The Relay Chain: A Scalable Dynamic Communication Link between an Exploratory Underwater Shoal and a Surface Vehicle.
Proceedings of the Fourteenth International Conference on the Simulation and Synthesis of Living Systems, 2014
Novel Approaches to the Visualization and Quantification of Biological Simulations by Emulating Experimental Techniques.
Proceedings of the Fourteenth International Conference on the Simulation and Synthesis of Living Systems, 2014
Proceedings of the Fourteenth International Conference on the Simulation and Synthesis of Living Systems, 2014
2013
<i>Spartan</i>: A Comprehensive Tool for Understanding Uncertainty in Simulations of Biological Systems.
PLoS Comput. Biol., 2013
A Petri Net Model of Granulomatous Inflammation: Implications for IL-10 Mediated Control of <i>Leishmania donovani</i> Infection.
PLoS Comput. Biol., 2013
In silico investigation into dendritic cell regulation of CD8Treg mediated killing of Th1 cells in murine experimental autoimmune encephalomyelitis.
BMC Bioinform., 2013
In silico investigation of novel biological pathways: The role of CD200 in regulation of T cell priming in experimental autoimmune encephalomyelitis.
Biosyst., 2013
Proceedings of the Towards Autonomous Robotic Systems - 14th Annual Conference, 2013
Proceedings of the Towards Autonomous Robotic Systems - 14th Annual Conference, 2013
Proceedings of the Twelfth European Conference on the Synthesis and Simulation of Living Systems: Advances in Artificial Life, 2013
Proceedings of the Twelfth European Conference on the Synthesis and Simulation of Living Systems: Advances in Artificial Life, 2013
Proceedings of the Twelfth European Conference on the Synthesis and Simulation of Living Systems: Advances in Artificial Life, 2013
Proceedings of the Twelfth European Conference on the Synthesis and Simulation of Living Systems: Advances in Artificial Life, 2013
Scenario-based modeling to capture requirements for immune inspired profile adaptation.
Proceedings of the 8th International Conference on Information Technology in Asia, 2013
2012
Proceedings of the Handbook of Natural Computing, 2012
IEEE Trans. Syst. Man Cybern. Part C, 2012
Automatic Machine Code Generation for a Transport Triggered Architecture using Cartesian Genetic Programming.
Int. J. Adapt. Resilient Auton. Syst., 2012
Extending an Established Simulation: Exploration of the Possible Effects Using a Case Study in Experimental Autoimmune Encephalomyelitis.
Proceedings of the Information Processign in Cells and Tissues, 2012
Proceedings of the Artificial Immune Systems - 11th International Conference, 2012
Validation of performance data using experimental verification process in wireless sensor network.
Proceedings of 2012 IEEE 17th International Conference on Emerging Technologies & Factory Automation, 2012
Proceedings of the Swarm Intelligence - 8th International Conference, 2012
Profiling the fault tolerance for the adaptive Protein Processing Associative Memory.
Proceedings of the 2012 NASA/ESA Conference on Adaptive Hardware and Systems, 2012
2011
Robotics Auton. Syst., 2011
Nat. Comput., 2011
From Bidirectional Associative Memory to a noise-tolerant, robust Protein Processor Associative Memory.
Artif. Intell., 2011
Proceedings of the 33th Communicating Process Architectures Conference, 2011
Proceedings of the Fifth IEEE Conference on Self-Adaptive and Self-Organizing Systems, 2011
Proceedings of the 17th IEEE Pacific Rim International Symposium on Dependable Computing, 2011
In Silico Investigation into CD8Treg Mediated Recovery in Murine Experimental Autoimmune Encephalomyelitis.
Proceedings of the Artificial Immune Systems - 10th International Conference, 2011
Proceedings of the Artificial Immune Systems - 10th International Conference, 2011
Collective Self-detection Scheme for Adaptive Error Detection in a Foraging Swarm of Robots.
Proceedings of the Artificial Immune Systems - 10th International Conference, 2011
Modelling Containment Mechanisms in the Immune System for Applications in Engineering - (Extended Abstract).
Proceedings of the Artificial Immune Systems - 10th International Conference, 2011
Proceedings of the Artificial Immune Systems - 10th International Conference, 2011
Towards Argument-Driven Validation of an <i>in silico</i> Model of Immune Tissue Organogenesis.
Proceedings of the Artificial Immune Systems - 10th International Conference, 2011
Proceedings of the Genetic Programming - 14th European Conference, 2011
A flexible decentralised communication architecture on a field programmable gate array for swarm system simulations.
Proceedings of the IEEE Congress on Evolutionary Computation, 2011
Hardware architecture for a bidirectional hetero-associative Protein Processing Associative Memory.
Proceedings of the IEEE Congress on Evolutionary Computation, 2011
Proceedings of the Bio-Inspired Models of Networks, Information, and Computing Systems, 2011
Proceedings of the Bio-Inspired Models of Networks, Information, and Computing Systems, 2011
Proceedings of the Bio-Inspired Models of Networks, Information, and Computing Systems, 2011
2010
Neural Comput. Appl., 2010
Artificial Immune Systems: structure, function, diversity and an application to biclustering.
Nat. Comput., 2010
An experimental comparison of a genetic algorithm and a hill-climber for term selection.
J. Documentation, 2010
Hierarchical classification of G-Protein-Coupled Receptors with data-driven selection of attributes and classifiers.
Int. J. Data Min. Bioinform., 2010
Proceedings of the Nature Inspired Cooperative Strategies for Optimization, 2010
Proceedings of the Distributed, Parallel and Biologically Inspired Systems, 2010
Proceedings of the 15th IEEE International Conference on Engineering of Complex Computer Systems, 2010
Proceedings of the 15th IEEE International Conference on Engineering of Complex Computer Systems, 2010
Towards a Principled Design of Bio-inspired Solutions to Adaptive Information Filtering.
Proceedings of the 15th IEEE International Conference on Engineering of Complex Computer Systems, 2010
Proceedings of the Artificial Immune Systems, 9th International Conference, 2010
A Developmental and Immune-Inspired Dynamic Task Allocation Algorithm for Microprocessor Array Systems.
Proceedings of the Artificial Immune Systems, 9th International Conference, 2010
Proceedings of the Artificial Immune Systems, 9th International Conference, 2010
Proceedings of the IEEE Congress on Evolutionary Computation, 2010
Proceedings of the IEEE Congress on Evolutionary Computation, 2010
Proceedings of the Swarm Intelligence - 7th International Conference, 2010
2009
Proceedings of the Encyclopedia of Complexity and Systems Science, 2009
An Artificial Immune System for Clustering Amino Acids in the Context of Protein Function Classification.
J. Math. Model. Algorithms, 2009
Proceedings of the First International Conference of Soft Computing and Pattern Recognition, 2009
Proceedings of the 2009 IEEE Workshop on Robotic Intelligence in Informationally Structured Space, 2009
Proceedings of the Artificial Immune Systems, 8th International Conference, 2009
Proceedings of the Artificial Immune Systems, 8th International Conference, 2009
Proceedings of the Artificial Immune Systems, 8th International Conference, 2009
Proceedings of the IEEE Congress on Evolutionary Computation, 2009
Proceedings of the IEEE Congress on Evolutionary Computation, 2009
Proceedings of the IEEE Congress on Evolutionary Computation, 2009
Nominal-Yield-Area Tradeoff in Automatic Synthesis of Analog Circuits: A Genetic Programming Approach Using Immune-Inspired Operators.
Proceedings of the NASA/ESA Conference on Adaptive Hardware and Systems, 2009
2008
An immune network inspired evolutionary algorithm for the diagnosis of Parkinson's disease.
Biosyst., 2008
AISIID: An artificial immune system for interesting information discovery on the web.
Appl. Soft Comput., 2008
Appl. Soft Comput., 2008
Proceedings of the Unconventional Computing, 7th International Conference, 2008
Proceedings of the Second IEEE International Conference on Self-Adaptive and Self-Organizing Systems, 2008
Proceedings of the Second IEEE International Conference on Self-Adaptive and Self-Organizing Systems, 2008
Proceedings of the Biologically-Inspired Collaborative Computing, 2008
Hardware Acceleration of an Immune Network Inspired Evolutionary Algorithm for Medical Diagnosis.
Proceedings of the Evolvable Systems: From Biology to Hardware, 2008
An Artificial Immune System for Evolving Amino Acid Clusters Tailored to Protein Function Prediction.
Proceedings of the Artificial Immune Systems, 7th International Conference, 2008
Proceedings of the Artificial Immune Systems, 7th International Conference, 2008
Proceedings of the Artificial Immune Systems, 7th International Conference, 2008
Proceedings of the Artificial Immune Systems, 7th International Conference, 2008
Proceedings of the Artificial Immune Systems, 7th International Conference, 2008
Proceedings of the Artificial Immune Systems, 7th International Conference, 2008
Proceedings of the 11th International Conference on Information Fusion, 2008
Proceedings of the Visions of Computer Science, 2008
Proceedings of the Eleventh International Conference on the Synthesis and Simulation of Living Systems, 2008
Investigating Patterns for the Process-Oriented Modelling and Simulation of Space in Complex Systems.
Proceedings of the Eleventh International Conference on the Synthesis and Simulation of Living Systems, 2008
2007
IEEE Trans. Syst. Man Cybern. Part C, 2007
IEEE Trans. Evol. Comput., 2007
IEEE Trans. Evol. Comput., 2007
Proceedings of the 2007 IEEE Workshop on Evolvable and Adaptive Hardware, 2007
Proceedings of the Artificial Immune Systems, 6th International Conference, 2007
Proceedings of the Artificial Immune Systems, 6th International Conference, 2007
Proceedings of the IEEE Symposium on Foundations of Computational Intelligence, 2007
The Immune System in Pieces: Computational Lessons from Degeneracy in the Immune System.
Proceedings of the IEEE Symposium on Foundations of Computational Intelligence, 2007
Comments on real-valued negative selection vs. real-valued positive selection and one-class SVM.
Proceedings of the IEEE Congress on Evolutionary Computation, 2007
Proceedings of the IEEE Congress on Evolutionary Computation, 2007
2006
Int. J. Parallel Emergent Distributed Syst., 2006
Artificial Immune Systems for IT-Security (Künstliche Immunsysteme für IT-Sicherheit).
it Inf. Technol., 2006
"Going Back to our Roots": Second Generation Biocomputing.
Int. J. Unconv. Comput., 2006
Proceedings of the Intelligent Information Processing and Web Mining, 2006
On the Use of Hyperspheres in Artificial Immune Systems as Antibody Recognition Regions.
Proceedings of the Artificial Immune Systems, 5th International Conference, 2006
Proceedings of the Artificial Immune Systems, 5th International Conference, 2006
Proceedings of the Artificial Immune Systems, 5th International Conference, 2006
On the Investigation of Artificial Immune Systems on Imbalanced Data Classification for Power Distribution System Fault Cause Identification.
Proceedings of the IEEE International Conference on Evolutionary Computation, 2006
Proceedings of the IEEE International Conference on Evolutionary Computation, 2006
2005
Parallel Algorithms Appl., 2005
Introduction.
Int. J. Unconv. Comput., 2005
Proceedings of the Neural Nets, 16th Italian Workshop on Neural Nets, 2005
On Diversity and Artificial Immune Systems: Incorporating a Diversity Operator into aiNet.
Proceedings of the Neural Nets, 16th Italian Workshop on Neural Nets, 2005
A Comparative Study of Real-Valued Negative Selection to Statistical Anomaly Detection Techniques.
Proceedings of the Artificial Immune Systems: 4th International Conference, 2005
Proceedings of the Artificial Immune Systems: 4th International Conference, 2005
Proceedings of the Artificial Immune Systems: 4th International Conference, 2005
Proceedings of the Artificial Immune Systems: 4th International Conference, 2005
Proceedings of the Artificial Immune Systems: 4th International Conference, 2005
Proceedings of the Genetic and Evolutionary Computation Conference, 2005
Proceedings of the Advances in Artificial Life, 8th European Conference, 2005
On the appropriateness of negative selection defined over Hamming shape-space as a network intrusion detection system.
Proceedings of the IEEE Congress on Evolutionary Computation, 2005
2004
Artificial Immune Recognition System (AIRS): An Immune-Inspired Supervised Learning Algorithm.
Genet. Program. Evolvable Mach., 2004
IEEE Intell. Informatics Bull., 2004
Proceedings of the Artificial Immune Systems, Third International Conference, 2004
Proceedings of the Artificial Immune Systems, Third International Conference, 2004
Proceedings of the Artificial Immune Systems, Third International Conference, 2004
Proceedings of the Artificial Immune Systems, Third International Conference, 2004
Proceedings of the Genetic and Evolutionary Computation, 2004
Assessing the performance of two immune inspired algorithms and a hybrid genetic algorithm for function optimisation.
Proceedings of the IEEE Congress on Evolutionary Computation, 2004
2003
Timidity: A Useful Emotional Mechanism for Robot Control?.
Informatica (Slovenia), 2003
Genet. Program. Evolvable Mach., 2003
Proceedings of the Artificial Immune Systems, Second International Conference, 2003
Proceedings of the Artificial Immune Systems, Second International Conference, 2003
Revisiting the Foundations of Artificial Immune Systems: A Problem-Oriented Perspective.
Proceedings of the Artificial Immune Systems, Second International Conference, 2003
Proceedings of the Genetic and Evolutionary Computation, 2003
Proceedings of the IEEE Congress on Evolutionary Computation, 2003
2002
Proceedings of the 2002 Congress on Evolutionary Computation, 2002
Springer, ISBN: 978-1-85233-594-6, 2002
2001
Knowl. Based Syst., 2001
Proceedings of the 2001 IEEE International Conference on Data Mining, 29 November, 2001
2000
Artificial immune systems : a novel data analysis technique inspired by the immune network theory.
PhD thesis, 2000
1998
Proceedings of the IEEE International Conference on Systems, Man and Cybernetics, 1998