Nicola J. Mulder
Orcid: 0000-0003-4905-0941Affiliations:
- University of Cape Town, South Africa
According to our database1,
Nicola J. Mulder
authored at least 69 papers
between 2000 and 2024.
Collaborative distances:
Collaborative distances:
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on orcid.org
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Bibliography
2024
The African Human Microbiome Portal: a public web portal of curated metagenomic metadata.
Database J. Biol. Databases Curation, January, 2024
2023
Neuroinformatics, January, 2023
MetaNovo: An open-source pipeline for probabilistic peptide discovery in complex metaproteomic datasets.
PLoS Comput. Biol., 2023
2022
Correction: Ten simple rules for organizing a bioinformatics training course in low- and middle-income countries.
PLoS Comput. Biol., 2022
The Sickle Cell Disease Ontology: recent development and expansion of the universal sickle cell knowledge representation.
Database J. Biol. Databases Curation, 2022
2021
Using a multiple-delivery-mode training approach to develop local capacity and infrastructure for advanced bioinformatics in Africa.
PLoS Comput. Biol., 2021
Ten simple rules for organizing a bioinformatics training course in low- and middle-income countries.
PLoS Comput. Biol., 2021
PLoS Comput. Biol., 2021
Data Management Plans in the genomics research revolution of Africa: Challenges and recommendations.
J. Biomed. Informatics, 2021
Database J. Biol. Databases Curation, 2021
IHP-PING - generating integrated human protein-protein interaction networks on-the-fly.
Briefings Bioinform., 2021
Briefings Bioinform., 2021
2020
FRANC: a unified framework for multi-way local ancestry deconvolution with high density SNP data.
Briefings Bioinform., 2020
2019
Advancing the international data science workforce through shared training and education.
F1000Research, 2019
Data Sci. J., 2019
Proposed Guideline for Minimum Information Stroke Research and Clinical Data Reporting.
Data Sci. J., 2019
The H3ABioNet helpdesk: an online bioinformatics resource, enhancing Africa's capacity for genomics research.
BMC Bioinform., 2019
GenGraph: a python module for the simple generation and manipulation of genome graphs.
BMC Bioinform., 2019
A comprehensive survey of models for dissecting local ancestry deconvolution in human genome.
Briefings Bioinform., 2019
2018
PLoS Comput. Biol., 2018
The development and application of bioinformatics core competencies to improve bioinformatics training and education.
PLoS Comput. Biol., 2018
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics.
BMC Bioinform., 2018
Large-scale data-driven integrative framework for extracting essential targets and processes from disease-associated gene data sets.
Briefings Bioinform., 2018
Multi-stage Association Analysis of Glioblastoma Gene Expressions with Texture and Spatial Patterns.
Proceedings of the Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2018
Relating connectivity changes in brain networks to genetic information in Alzheimer patients.
Proceedings of the 15th IEEE International Symposium on Biomedical Imaging, 2018
2017
Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.
PLoS Comput. Biol., 2017
Designing a course model for distance-based online bioinformatics training in Africa: The H3ABioNet experience.
PLoS Comput. Biol., 2017
PLoS Comput. Biol., 2017
F1000Research, 2017
Genomic Research Data Generation, Analysis and Sharing - Challenges in the African Setting.
Data Sci. J., 2017
Bioinform., 2017
Gene Ontology semantic similarity tools: survey on features and challenges for biological knowledge discovery.
Briefings Bioinform., 2017
2016
Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee).
PLoS Comput. Biol., 2016
The Development of Computational Biology in South Africa: Successes Achieved and Lessons Learnt.
PLoS Comput. Biol., 2016
A-DaGO-Fun: an adaptable Gene Ontology semantic similarity-based functional analysis tool.
Bioinform., 2016
ancGWAS: a post genome-wide association study method for interaction, pathway and ancestry analysis in homogeneous and admixed populations.
Bioinform., 2016
2015
PLoS Comput. Biol., 2015
PLoS Comput. Biol., 2015
Briefings Bioinform., 2015
2014
<i>PPI layouts</i>: BioJS components for the display of Protein-Protein Interactions.
F1000Research, 2014
2013
DaGO-Fun: tool for Gene Ontology-based functional analysis using term information content measures.
BMC Bioinform., 2013
Briefings Bioinform., 2013
Identification of All Exact and Approximate Inverted Repeats in Regular and Weighted Sequences.
Proceedings of the Engineering Applications of Neural Networks, 2013
2012
Nucleic Acids Res., 2012
Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation.
Database J. Biol. Databases Curation, 2012
Adv. Bioinformatics, 2012
2011
BMC Bioinform., 2011
From sets to graphs: towards a realistic enrichment analysis of transcriptomic systems.
Bioinform., 2011
Generation and Analysis of Large-Scale Data-Driven <i>Mycobacterium tuberculosis</i> Functional Networks for Drug Target Identification.
Adv. Bioinformatics, 2011
2009
2007
2005
2003
The Proteome Analysis database: a tool for the in silico analysis of whole proteomes.
Nucleic Acids Res., 2003
Nucleic Acids Res., 2003
2002
Bioinform., 2002
InterPro: An Integrated Documentation Resource for Protein Families, Domains and Functional Sites
Briefings Bioinform., 2002
Briefings Bioinform., 2002
Automation of Protein Sequence Characterization and Its Application in Whole Proteome Analysis.
Proceedings of the Gene Regulations and Metabolism - Postgenomic Computational Approaches, 2002
2001
Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes.
Nucleic Acids Res., 2001
The InterPro database, an integrated documentation resource for protein families, domains and functional sites.
Nucleic Acids Res., 2001
2000
InterPro-an integrated documentation resource for protein families, domains and functional sites.
Bioinform., 2000
Proteome Analysis: Application of InterPro and CluSTr for the Functional Classification of Proteins in Whole Genomes.
Proceedings of the German Conference on Bioinformatics (GCB 2000), 2000