Yifan Peng

Orcid: 0000-0002-8581-8674

According to our database1, Yifan Peng authored at least 179 papers between 2012 and 2024.

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Bibliography

2024
Multimodal multi-objective optimization based on local optimal neighborhood crowding distance differential evolution algorithm.
Neural Comput. Appl., January, 2024

Uncovering Misattributed Suicide Causes through Annotation Inconsistency Detection in Death Investigation Notes.
CoRR, 2024

Evaluating GPT-4 with Vision on Detection of Radiological Findings on Chest Radiographs.
CoRR, 2024

Deep learning with noisy labels in medical prediction problems: a scoping review.
CoRR, 2024

MSLM-S2ST: A Multitask Speech Language Model for Textless Speech-to-Speech Translation with Speaker Style Preservation.
CoRR, 2024

An Empirical Study of Speech Language Models for Prompt-Conditioned Speech Synthesis.
CoRR, 2024

OWSM-CTC: An Open Encoder-Only Speech Foundation Model for Speech Recognition, Translation, and Language Identification.
CoRR, 2024

A survey of recent methods for addressing AI fairness and bias in biomedicine.
CoRR, 2024

SpeechComposer: Unifying Multiple Speech Tasks with Prompt Composition.
CoRR, 2024

OWSM v3.1: Better and Faster Open Whisper-Style Speech Models based on E-Branchformer.
CoRR, 2024

Improving Fairness of Automated Chest X-ray Diagnosis by Contrastive Learning.
CoRR, 2024

Nonparametric Estimation via Variance-Reduced Sketching.
CoRR, 2024

Contextualized Automatic Speech Recognition with Attention-Based Bias Phrase Boosted Beam Search.
CoRR, 2024

Hidden Flaws Behind Expert-Level Accuracy of GPT-4 Vision in Medicine.
CoRR, 2024

A Span-based Model for Extracting Overlapping PICO Entities from RCT Publications.
CoRR, 2024

Neural Bokeh: Learning Lens Blur for Computational Videography and Out-of-Focus Mixed Reality.
Proceedings of the IEEE Conference Virtual Reality and 3D User Interfaces, 2024

2023
A scoping review on multimodal deep learning in biomedical images and texts.
J. Biomed. Informatics, October, 2023

An NLP approach to identify SDoH-related circumstance and suicide crisis from death investigation narratives.
J. Am. Medical Informatics Assoc., July, 2023

Representing and utilizing clinical textual data for real world studies: An OHDSI approach.
J. Biomed. Informatics, June, 2023

Enhancing thoracic disease detection using chest X-rays from PubMed Central Open Access.
Comput. Biol. Medicine, June, 2023

Radiomics-Guided Global-Local Transformer for Weakly Supervised Pathology Localization in Chest X-Rays.
IEEE Trans. Medical Imaging, March, 2023

Editorial: Pattern recognition for healthcare analytics.
Frontiers Digit. Health, March, 2023

Off-Axis Layered Displays: Hybrid Direct-View/Near-Eye Mixed Reality with Focus Cues.
IEEE Trans. Vis. Comput. Graph., 2023

Evaluating large language models on medical evidence summarization.
npj Digit. Medicine, 2023

Adopting and expanding ethical principles for generative artificial intelligence from military to healthcare.
npj Digit. Medicine, 2023

Efficient long-range convolutions for point clouds.
J. Comput. Phys., 2023

A non-gradient method for solving elliptic partial differential equations with deep neural networks.
J. Comput. Phys., 2023

<i>EvidenceMap</i>: a three-level knowledge representation for medical evidence computation and comprehension.
J. Am. Medical Informatics Assoc., 2023

Leveraging Generative AI for Clinical Evidence Summarization Needs to Achieve Trustworthiness.
CoRR, 2023

Towards long-tailed, multi-label disease classification from chest X-ray: Overview of the CXR-LT challenge.
CoRR, 2023

UniverSLU: Universal Spoken Language Understanding for Diverse Classification and Sequence Generation Tasks with a Single Network.
CoRR, 2023

Dynamic-SUPERB: Towards A Dynamic, Collaborative, and Comprehensive Instruction-Tuning Benchmark for Speech.
CoRR, 2023

Voxtlm: unified decoder-only models for consolidating speech recognition/synthesis and speech/text continuation tasks.
CoRR, 2023

Demonstration-based learning for few-shot biomedical named entity recognition under machine reading comprehension.
CoRR, 2023

High-performance Data Management for Whole Slide Image Analysis in Digital Pathology.
CoRR, 2023

From Military to Healthcare: Adopting and Expanding Ethical Principles for Generative Artificial Intelligence.
CoRR, 2023

An empirical study of using radiology reports and images to improve ICU mortality prediction.
CoRR, 2023

Reducing Barriers to Self-Supervised Learning: HuBERT Pre-training with Academic Compute.
CoRR, 2023

DPHuBERT: Joint Distillation and Pruning of Self-Supervised Speech Models.
CoRR, 2023

A Comparative Study on E-Branchformer vs Conformer in Speech Recognition, Translation, and Understanding Tasks.
CoRR, 2023

Generative Modeling via Hierarchical Tensor Sketching.
CoRR, 2023

FactReranker: Fact-guided Reranker for Faithful Radiology Report Summarization.
CoRR, 2023

Evaluate underdiagnosis and overdiagnosis bias of deep learning model on primary open-angle glaucoma diagnosis in under-served patient populations.
CoRR, 2023

Attend Who is Weak: Pruning-assisted Medical Image Localization under Sophisticated and Implicit Imbalances.
Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, 2023

Adaptive Recurrent Frame Prediction with Learnable Motion Vectors.
Proceedings of the SIGGRAPH Asia 2023 Conference Papers, 2023

How Good Is ChatGPT for Medication Evidence Synthesis?
Proceedings of the Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of MIE 2023, Gothenburg, Sweden, 22, 2023

Utilizing Longitudinal Chest X-Rays and Reports to Pre-fill Radiology Reports.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

How Does Pruning Impact Long-Tailed Multi-label Medical Image Classifiers?
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2023, 2023

CMU's IWSLT 2023 Simultaneous Speech Translation System.
Proceedings of the 20th International Conference on Spoken Language Translation, 2023

Message from the ISMAR 2023 Science and Technology Conference Program Chairs.
Proceedings of the IEEE International Symposium on Mixed and Augmented Reality, 2023

Optimizing Embedding Space with Sub-categorical Supervised Pre-training: A Theoretical Approach Towards Improving Sepsis Prediction.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

Identification of Offensive Language in Social Media Using Prompt Learning.
Proceedings of the 11th IEEE International Conference on Healthcare Informatics, 2023

Learning A Room with the Occ-SDF Hybrid: Signed Distance Function Mingled with Occupancy Aids Scene Representation.
Proceedings of the IEEE/CVF International Conference on Computer Vision, 2023

I3D: Transformer Architectures with Input-Dependent Dynamic Depth for Speech Recognition.
Proceedings of the IEEE International Conference on Acoustics, 2023

Structured Pruning of Self-Supervised Pre-Trained Models for Speech Recognition and Understanding.
Proceedings of the IEEE International Conference on Acoustics, 2023

Speechlmscore: Evaluating Speech Generation Using Speech Language Model.
Proceedings of the IEEE International Conference on Acoustics, 2023

E-Branchformer-Based E2E SLU Toward Stop on-Device Challenge.
Proceedings of the IEEE International Conference on Acoustics, 2023

The Pipeline System of ASR and NLU with MLM-based data Augmentation Toward Stop Low-Resource Challenge.
Proceedings of the IEEE International Conference on Acoustics, 2023

Improving Massively Multilingual ASR with Auxiliary CTC Objectives.
Proceedings of the IEEE International Conference on Acoustics, 2023

A Study on the Integration of Pipeline and E2E SLU Systems for Spoken Semantic Parsing Toward Stop Quality Challenge.
Proceedings of the IEEE International Conference on Acoustics, 2023

Reproducing Whisper-Style Training Using An Open-Source Toolkit And Publicly Available Data.
Proceedings of the IEEE Automatic Speech Recognition and Understanding Workshop, 2023

Joint Prediction and Denoising for Large-Scale Multilingual Self-Supervised Learning.
Proceedings of the IEEE Automatic Speech Recognition and Understanding Workshop, 2023

ESPnet-ST-v2: Multipurpose Spoken Language Translation Toolkit.
Proceedings of the 61st Annual Meeting of the Association for Computational Linguistics: System Demonstrations, 2023

Less Likely Brainstorming: Using Language Models to Generate Alternative Hypotheses.
Proceedings of the Findings of the Association for Computational Linguistics: ACL 2023, 2023

2022
Color Contrast Enhanced Rendering for Optical See-Through Head-Mounted Displays.
IEEE Trans. Vis. Comput. Graph., 2022

Video See-Through Mixed Reality with Focus Cues.
IEEE Trans. Vis. Comput. Graph., 2022

Anomaly Detection of Calcifications in Mammography Based on 11, 000 Negative Cases.
IEEE Trans. Biomed. Eng., 2022

Robust convolutional neural networks against adversarial attacks on medical images.
Pattern Recognit., 2022

Learning scale awareness in keypoint extraction and description.
Pattern Recognit., 2022

Global-Local attention network with multi-task uncertainty loss for abnormal lymph node detection in MR images.
Medical Image Anal., 2022

Trustworthy assertion classification through prompting.
J. Biomed. Informatics, 2022

Design and validation of a FHIR-based EHR-driven phenotyping toolbox.
J. Am. Medical Informatics Assoc., 2022

SODA: A Natural Language Processing Package to Extract Social Determinants of Health for Cancer Studies.
CoRR, 2022

Prior Knowledge Enhances Radiology Report Generation.
CoRR, 2022

Temperature-Robust Learned Image Recovery for Shallow-Designed Imaging Systems.
Adv. Intell. Syst., 2022

Knowledge-Augmented Contrastive Learning for Abnormality Classification and Localization in Chest X-rays with Radiomics using a Feedback Loop.
Proceedings of the IEEE/CVF Winter Conference on Applications of Computer Vision, 2022

A Study on the Integration of Pre-Trained SSL, ASR, LM and SLU Models for Spoken Language Understanding.
Proceedings of the IEEE Spoken Language Technology Workshop, 2022

E-Branchformer: Branchformer with Enhanced Merging for Speech Recognition.
Proceedings of the IEEE Spoken Language Technology Workshop, 2022

Holographic Glasses for Virtual Reality.
Proceedings of the SIGGRAPH '22: Special Interest Group on Computer Graphics and Interactive Techniques Conference, Vancouver, BC, Canada, August 7, 2022

Time-multiplexed Neural Holography: A Flexible Framework for Holographic Near-eye Displays with Fast Heavily-quantized Spatial Light Modulators.
Proceedings of the SIGGRAPH '22: Special Interest Group on Computer Graphics and Interactive Techniques Conference, Vancouver, BC, Canada, August 7, 2022

Few-Shot Learning Geometric Ensemble for Multi-label Classification of Chest X-Rays.
Proceedings of the Data Augmentation, Labelling, and Imperfections, 2022

Multi-scale Multi-structure Siamese Network (MMSNet) for Primary Open-Angle Glaucoma Prediction.
Proceedings of the Machine Learning in Medical Imaging - 13th International Workshop, 2022

Predicting Age-related Macular Degeneration Progression with Longitudinal Fundus Images Using Deep Learning.
Proceedings of the Machine Learning in Medical Imaging - 13th International Workshop, 2022

Long-Tailed Classification of Thorax Diseases on Chest X-Ray: A New Benchmark Study.
Proceedings of the Data Augmentation, Labelling, and Imperfections, 2022

Lymph node detection in T2 MRI with transformers.
Proceedings of the Medical Imaging 2022: Computer-Aided Diagnosis, 2022

CMU's IWSLT 2022 Dialect Speech Translation System.
Proceedings of the 19th International Conference on Spoken Language Translation, 2022

Attention Weight Smoothing Using Prior Distributions for Transformer-Based End-to-End ASR.
Proceedings of the Interspeech 2022, 2022

Branchformer: Parallel MLP-Attention Architectures to Capture Local and Global Context for Speech Recognition and Understanding.
Proceedings of the International Conference on Machine Learning, 2022

Radiology Text Analysis System (RadText): Architecture and Evaluation.
Proceedings of the 10th IEEE International Conference on Healthcare Informatics, 2022

RoS-KD: A Robust Stochastic Knowledge Distillation Approach for Noisy Medical Imaging.
Proceedings of the IEEE International Conference on Data Mining, 2022

ESPnet-SLU: Advancing Spoken Language Understanding Through ESPnet.
Proceedings of the IEEE International Conference on Acoustics, 2022

Classifying Cyber-Risky Clinical Notes by Employing Natural Language Processing.
Proceedings of the 55th Hawaii International Conference on System Sciences, 2022

EchoGen: Generating Conclusions from Echocardiogram Notes.
Proceedings of the 21st Workshop on Biomedical Language Processing, 2022

Supervised pretraining through contrastive categorical positive samplings to improve COVID-19 mortality prediction.
Proceedings of the BCB '22: 13th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics, Northbrook, Illinois, USA, August 7, 2022

Prompt-based Learning for Assertion Classification in Clinical Notes.
Proceedings of the AMIA 2022, 2022

2021
Differentiable Compound Optics and Processing Pipeline Optimization for End-to-end Camera Design.
ACM Trans. Graph., 2021

Neural 3D holography: learning accurate wave propagation models for 3D holographic virtual and augmented reality displays.
ACM Trans. Graph., 2021

Generalized Zero-Shot Chest X-Ray Diagnosis Through Trait-Guided Multi-View Semantic Embedding With Self-Training.
IEEE Trans. Medical Imaging, 2021

COVID-19-CT-CXR: A Freely Accessible and Weakly Labeled Chest X-Ray and CT Image Collection on COVID-19 From Biomedical Literature.
IEEE Trans. Big Data, 2021

Multimodal, multitask, multiattention (M3) deep learning detection of reticular pseudodrusen: Toward automated and accessible classification of age-related macular degeneration.
J. Am. Medical Informatics Assoc., 2021

CU-UD: text-mining drug and chemical-protein interactions with ensembles of BERT-based models.
CoRR, 2021

A framework for massive scale personalized promotion.
CoRR, 2021

Cross-Modal Contrastive Learning for Abnormality Classification and Localization in Chest X-rays with Radiomics using a Feedback Loop.
CoRR, 2021

Leveraging Deep Representations of Radiology Reports in Survival Analysis for Predicting Heart Failure Patient Mortality.
Proceedings of the 2021 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies, 2021

RadBERT-CL: Factually-Aware Contrastive Learning For Radiology Report Classification.
Proceedings of the Machine Learning for Health, 2021

Detection of Lymph Nodes in T2 MRI Using Neural Network Ensembles.
Proceedings of the Machine Learning in Medical Imaging - 12th International Workshop, 2021

Improving Joint Learning of Chest X-Ray and Radiology Report by Word Region Alignment.
Proceedings of the Machine Learning in Medical Imaging - 12th International Workshop, 2021

Learning Few-Shot Chest X-Ray Diagnosis Using Images From The Published Scientific Literature.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

Pneumonia Detection On Chest X-Ray Using Radiomic Features And Contrastive Learning.
Proceedings of the 18th IEEE International Symposium on Biomedical Imaging, 2021

An empirical study of using radiology reports and images to improve ICU-mortality prediction.
Proceedings of the 9th IEEE International Conference on Healthcare Informatics, 2021

SCALP - Supervised Contrastive Learning for Cardiopulmonary Disease Classification and Localization in Chest X-rays using Patient Metadata.
Proceedings of the IEEE International Conference on Data Mining, 2021

Depth from Defocus with Learned Optics for Imaging and Occlusion-aware Depth Estimation.
Proceedings of the IEEE International Conference on Computational Photography, 2021

Improving BERT Model Using Contrastive Learning for Biomedical Relation Extraction.
Proceedings of the 20th Workshop on Biomedical Language Processing, 2021

Using Radiomics as Prior Knowledge for Thorax Disease Classification and Localization in Chest X-rays.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

Multi-task deep learning-based survival analysis on the prognosis of late AMD using the longitudinal data in AREDS.
Proceedings of the AMIA 2021, American Medical Informatics Association Annual Symposium, San Diego, CA, USA, October 30, 2021, 2021

2020
End-to-end Learned, Optically Coded Super-resolution SPAD Camera.
ACM Trans. Graph., 2020

Neural holography with camera-in-the-loop training.
ACM Trans. Graph., 2020

Automated abnormality classification of chest radiographs using deep convolutional neural networks.
npj Digit. Medicine, 2020

Predicting risk of late age-related macular degeneration using deep learning.
npj Digit. Medicine, 2020

Using Radiomics as Prior Knowledge for Abnormality Classification and Localization in Chest X-rays.
CoRR, 2020

Multi-modal, multi-task, multi-attention (M3) deep learning detection of reticular pseudodrusen: towards automated and accessible classification of age-related macular degeneration.
CoRR, 2020

Michelson Holography: Dual-SLM Holography with Camera-in-the-loop Optimization.
CoRR, 2020

Navigating the landscape of COVID-19 research through literature analysis: A bird's eye view.
CoRR, 2020

When text simplification is not enough: could a graph-based visualization facilitate consumers' comprehension of dietary supplement information?
CoRR, 2020

Deep optics: joint design of optics and image recovery algorithms for domain specific cameras.
Proceedings of the SIGGRAPH 2020: Special Interest Group on Computer Graphics and Interactive Techniques Conference, 2020

Neural Holography.
Proceedings of the SIGGRAPH 2020: Special Interest Group on Computer Graphics and Interactive Techniques Conference, 2020

COMe-SEE: Cross-modality Semantic Embedding Ensemble for Generalized Zero-Shot Diagnosis of Chest Radiographs.
Proceedings of the Interpretable and Annotation-Efficient Learning for Medical Image Computing, 2020

Microcalcification localization and cluster detection using unsupervised convolutional autoencoders and structural similarity index.
Proceedings of the Medical Imaging 2020: Computer-Aided Diagnosis, 2020

Deep Optics for Single-Shot High-Dynamic-Range Imaging.
Proceedings of the 2020 IEEE/CVF Conference on Computer Vision and Pattern Recognition, 2020

An Empirical Study of Multi-Task Learning on BERT for Biomedical Text Mining.
Proceedings of the 19th SIGBioMed Workshop on Biomedical Language Processing, 2020

Detection of reticular pseudodrusen using deep learning.
Proceedings of the AMIA 2020, 2020

Deep Optics: Learning Cameras and Optical Computing Systems.
Proceedings of the 54th Asilomar Conference on Signals, Systems, and Computers, 2020

Automatic recognition of abdominal lymph nodes from clinical text.
Proceedings of the 3rd Clinical Natural Language Processing Workshop, 2020

2019
Learned large field-of-view imaging with thin-plate optics.
ACM Trans. Graph., 2019

Holographic near-eye displays based on overlap-add stereograms.
ACM Trans. Graph., 2019

Wirtinger holography for near-eye displays.
ACM Trans. Graph., 2019

ML-Net: multi-label classification of biomedical texts with deep neural networks.
J. Am. Medical Informatics Assoc., 2019

A deep learning approach for automated detection of geographic atrophy from color fundus photographs.
CoRR, 2019

MULAN: Multitask Universal Lesion Analysis Network for Joint Lesion Detection, Tagging, and Segmentation.
Proceedings of the Medical Image Computing and Computer Assisted Intervention - MICCAI 2019, 2019

Fine-Grained Lesion Annotation in CT Images With Knowledge Mined From Radiology Reports.
Proceedings of the 16th IEEE International Symposium on Biomedical Imaging, 2019

A self-attention based deep learning method for lesion attribute detection from CT reports.
Proceedings of the 2019 IEEE International Conference on Healthcare Informatics, 2019

BioSentVec: creating sentence embeddings for biomedical texts.
Proceedings of the 2019 IEEE International Conference on Healthcare Informatics, 2019

Holistic and Comprehensive Annotation of Clinically Significant Findings on Diverse CT Images: Learning From Radiology Reports and Label Ontology.
Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, 2019

Transfer Learning in Biomedical Natural Language Processing: An Evaluation of BERT and ELMo on Ten Benchmarking Datasets.
Proceedings of the 18th BioNLP Workshop and Shared Task, 2019

A deep learning-based survival model for prediction of progression in late Age-related Macular Degeneration (AMD) from color fundus photographs.
Proceedings of the AMIA 2019, 2019

Automatic Classification and Reporting of Multiple Common Thorax Diseases Using Chest Radiographs.
Proceedings of the Deep Learning and Convolutional Neural Networks for Medical Imaging and Clinical Informatics, 2019

ChestX-ray: Hospital-Scale Chest X-ray Database and Benchmarks on Weakly Supervised Classification and Localization of Common Thorax Diseases.
Proceedings of the Deep Learning and Convolutional Neural Networks for Medical Imaging and Clinical Informatics, 2019

2018
End-to-end optimization of optics and image processing for achromatic extended depth of field and super-resolution imaging.
ACM Trans. Graph., 2018

LitVar: a semantic search engine for linking genomic variant data in PubMed and PMC.
Nucleic Acids Res., 2018

A multi-task deep learning model for the classification of Age-related Macular Degeneration.
CoRR, 2018

DeepSeeNet: A deep learning model for automated classification of patient-based age-related macular degeneration severity from color fundus photographs.
CoRR, 2018

Comment Generation for Source Code: State of the Art, Challenges and Opportunities.
CoRR, 2018

Chemical-protein relation extraction with ensembles of SVM, CNN, and RNN models.
CoRR, 2018

Extracting chemical-protein relations with ensembles of SVM and deep learning models.
Database J. Biol. Databases Curation, 2018

Focal sweep imaging with multi-focal diffractive optics.
Proceedings of the 2018 IEEE International Conference on Computational Photography, 2018

TieNet: Text-Image Embedding Network for Common Thorax Disease Classification and Reporting in Chest X-Rays.
Proceedings of the 2018 IEEE Conference on Computer Vision and Pattern Recognition, 2018

Depth and Transient Imaging With Compressive SPAD Array Cameras.
Proceedings of the 2018 IEEE Conference on Computer Vision and Pattern Recognition, 2018

2017
Mix-and-match holography.
ACM Trans. Graph., 2017

NegBio: a high-performance tool for negation and uncertainty detection in radiology reports.
CoRR, 2017

Revisiting Cross-Channel Information Transfer for Chromatic Aberration Correction.
Proceedings of the IEEE International Conference on Computer Vision, 2017

ChestX-Ray8: Hospital-Scale Chest X-Ray Database and Benchmarks on Weakly-Supervised Classification and Localization of Common Thorax Diseases.
Proceedings of the 2017 IEEE Conference on Computer Vision and Pattern Recognition, 2017

Deep learning for extracting protein-protein interactions from biomedical literature.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

BioCreative VI Precision Medicine Track: creating a training corpus for mining protein-protein interactions affected by mutations.
Proceedings of the BioNLP 2017, Vancouver, Canada, August 4, 2017, 2017

Text Mining Radiology Reports for Deep Learning Radiology Images.
Proceedings of the AMIA 2017, 2017

2016
The diffractive achromat full spectrum computational imaging with diffractive optics.
ACM Trans. Graph., 2016

Improving chemical disease relation extraction with rich features and weakly labeled data.
J. Cheminformatics, 2016

Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task.
Database J. Biol. Databases Curation, 2016

BioC-compatible full-text passage detection for protein-protein interactions using extended dependency graph.
Database J. Biol. Databases Curation, 2016

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID.
Database J. Biol. Databases Curation, 2016

Towards VR and AR enhancement: light field display with mid-air interaction.
Proceedings of the SIGGRAPH ASIA 2016, Macao, December 5-8, 2016, 2016

Towards VR and AR: 360° light field display with mid-air interaction.
Proceedings of the SIGGRAPH ASIA 2016, Macao, December 5-8, 2016 - Emerging Technologies, 2016

2015
miRTex: A Text Mining System for miRNA-Gene Relation Extraction.
PLoS Comput. Biol., 2015

An extended dependency graph for relation extraction in biomedical texts.
Proceedings of the Workshop on Biomedical Natural Language Processing, BioNLP@IJCNLP 2015, 2015

2014
A Generalizable NLP Framework for Fast Development of Pattern-based Biomedical Relation Extraction Systems.
BMC Bioinform., 2014

iSimp in BioC standard format: enhancing the interoperability of a sentence simplification system.
Database J. Biol. Databases Curation, 2014

BioC interoperability track overview.
Database J. Biol. Databases Curation, 2014

2013
BioC: a minimalist approach to interoperability for biomedical text processing.
Database J. Biol. Databases Curation, 2013

Studying Relationships between Human Gaze, Description, and Computer Vision.
Proceedings of the 2013 IEEE Conference on Computer Vision and Pattern Recognition, 2013

2012
iSimp: A sentence simplification system for biomedicail text.
Proceedings of the 2012 IEEE International Conference on Bioinformatics and Biomedicine, 2012


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